Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.62■□□□□ 0.57
COL25A1Q9BXS0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.62■□□□□ 0.57
COL25A1Q9BXS0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 FP700111.2-201ENST00000619190 1892 ntBASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 BCAR1-209ENST00000546196 1340 ntBASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 AC068472.1-201ENST00000474589 881 ntBASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 KRT19P2-202ENST00000557173 1012 ntBASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 AC017083.2-201ENST00000608069 979 ntBASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.61■□□□□ 0.57
COL25A1Q9BXS0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 CU639417.3-201ENST00000624240 1404 ntBASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 HAUS4P1-201ENST00000406739 1145 ntBASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 MIR4525-201ENST00000580000 75 ntBASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL25A1Q9BXS0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 HCG4-201ENST00000418983 998 ntBASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 AC074386.1-202ENST00000463561 864 ntBASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 AC009093.7-201ENST00000623853 1223 ntBASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 AL121761.2-201ENST00000598007 1648 ntBASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL25A1Q9BXS0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
COL25A1Q9BXS0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL25A1Q9BXS0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL25A1Q9BXS0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
COL25A1Q9BXS0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL25A1Q9BXS0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 MIR1909-201ENST00000411312 80 ntBASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.58■□□□□ 0.56
COL25A1Q9BXS0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms