Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.49■□□□□ 0.55
CPNE1Q99829 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CPNE1Q99829 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CPNE1Q99829 MFAP1P1-201ENST00000442257 1255 ntBASIC18.49■□□□□ 0.55
CPNE1Q99829 AC116562.2-201ENST00000507042 360 ntBASIC18.49■□□□□ 0.55
CPNE1Q99829 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE1Q99829 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.49■□□□□ 0.55
CPNE1Q99829 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CPNE1Q99829 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CPNE1Q99829 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CPNE1Q99829 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CPNE1Q99829 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CPNE1Q99829 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 REXO1L9P-201ENST00000604264 2108 ntBASIC18.49■□□□□ 0.55
CPNE1Q99829 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CPNE1Q99829 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CPNE1Q99829 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE1Q99829 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CPNE1Q99829 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CPNE1Q99829 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CPNE1Q99829 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CPNE1Q99829 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CPNE1Q99829 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE1Q99829 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE1Q99829 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CPNE1Q99829 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.48■□□□□ 0.55
CPNE1Q99829 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.48■□□□□ 0.55
CPNE1Q99829 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CPNE1Q99829 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CPNE1Q99829 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CPNE1Q99829 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE1Q99829 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE1Q99829 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE1Q99829 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CPNE1Q99829 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE1Q99829 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 CA15P1-201ENST00000481698 905 ntBASIC18.47■□□□□ 0.55
CPNE1Q99829 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.47■□□□□ 0.55
CPNE1Q99829 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE1Q99829 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE1Q99829 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.47■□□□□ 0.55
CPNE1Q99829 SLC25A1P4-201ENST00000567977 778 ntBASIC18.47■□□□□ 0.55
CPNE1Q99829 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CPNE1Q99829 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.47■□□□□ 0.55
CPNE1Q99829 ITM2C-210ENST00000620962 501 ntBASIC18.47■□□□□ 0.55
CPNE1Q99829 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE1Q99829 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 KRT8P50-201ENST00000562022 1438 ntBASIC18.47■□□□□ 0.55
CPNE1Q99829 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
CPNE1Q99829 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CPNE1Q99829 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE1Q99829 GMCL1P1-201ENST00000463439 1581 ntBASIC18.47■□□□□ 0.55
CPNE1Q99829 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE1Q99829 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CPNE1Q99829 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CPNE1Q99829 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CPNE1Q99829 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.46■□□□□ 0.55
CPNE1Q99829 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.46■□□□□ 0.55
CPNE1Q99829 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE1Q99829 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CPNE1Q99829 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE1Q99829 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE1Q99829 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE1Q99829 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CPNE1Q99829 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.46■□□□□ 0.55
CPNE1Q99829 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.46■□□□□ 0.55
CPNE1Q99829 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE1Q99829 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPNE1Q99829 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms