Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 RCN1P2-201ENST00000398357 915 ntBASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 AC116407.3-201ENST00000623905 1129 ntBASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 Z98044.1-201ENST00000632503 1764 ntBASIC19.09■□□□□ 0.65
NECTIN4Q96NY8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NECTIN4Q96NY8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NECTIN4Q96NY8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NECTIN4Q96NY8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NECTIN4Q96NY8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
NECTIN4Q96NY8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.08■□□□□ 0.65
NECTIN4Q96NY8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NECTIN4Q96NY8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 AC145285.3-201ENST00000564603 959 ntBASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 AC027601.4-201ENST00000611259 610 ntBASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 TP73-AS1-210ENST00000637775 1455 ntBASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 AC112777.1-201ENST00000540175 1423 ntBASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 KRT8P50-201ENST00000562022 1438 ntBASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN4Q96NY8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 IRX1P1-201ENST00000438849 1838 ntBASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 AC009533.2-201ENST00000543664 586 ntBASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 AL691403.2-201ENST00000618460 490 ntBASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN4Q96NY8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 HNRNPDP1-201ENST00000439535 754 ntBASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 FAM197Y3-203ENST00000618346 717 ntBASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 FP475955.4-201ENST00000623131 1990 ntBASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NECTIN4Q96NY8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms