Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP6NLQ92738 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP6NLQ92738 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.89■□□□□ 0.93
USP6NLQ92738 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP6NLQ92738 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
USP6NLQ92738 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6NLQ92738 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
USP6NLQ92738 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.88■□□□□ 0.93
USP6NLQ92738 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
USP6NLQ92738 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.88■□□□□ 0.93
USP6NLQ92738 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.88■□□□□ 0.93
USP6NLQ92738 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6NLQ92738 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
USP6NLQ92738 MIR7706-201ENST00000613747 67 ntBASIC20.88■□□□□ 0.93
USP6NLQ92738 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.88■□□□□ 0.93
USP6NLQ92738 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP6NLQ92738 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.87■□□□□ 0.93
USP6NLQ92738 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.87■□□□□ 0.93
USP6NLQ92738 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
USP6NLQ92738 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.87■□□□□ 0.93
USP6NLQ92738 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.87■□□□□ 0.93
USP6NLQ92738 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.87■□□□□ 0.93
USP6NLQ92738 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.87■□□□□ 0.93
USP6NLQ92738 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP6NLQ92738 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6NLQ92738 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6NLQ92738 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP6NLQ92738 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
USP6NLQ92738 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP6NLQ92738 AC096582.2-201ENST00000510860 516 ntBASIC20.87■□□□□ 0.93
USP6NLQ92738 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
USP6NLQ92738 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6NLQ92738 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP6NLQ92738 AL355877.3-201ENST00000622820 899 ntBASIC20.87■□□□□ 0.93
USP6NLQ92738 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
USP6NLQ92738 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
USP6NLQ92738 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6NLQ92738 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6NLQ92738 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6NLQ92738 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.87■□□□□ 0.93
USP6NLQ92738 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6NLQ92738 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.86■□□□□ 0.93
USP6NLQ92738 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
USP6NLQ92738 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 AC141586.3-201ENST00000562166 1838 ntBASIC20.86■□□□□ 0.93
USP6NLQ92738 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
USP6NLQ92738 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6NLQ92738 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6NLQ92738 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 RCN1P2-201ENST00000398357 915 ntBASIC20.86■□□□□ 0.93
USP6NLQ92738 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.86■□□□□ 0.93
USP6NLQ92738 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.86■□□□□ 0.93
USP6NLQ92738 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6NLQ92738 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6NLQ92738 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6NLQ92738 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 POLD2P1-201ENST00000511220 997 ntBASIC20.86■□□□□ 0.93
USP6NLQ92738 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6NLQ92738 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.86■□□□□ 0.93
USP6NLQ92738 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.86■□□□□ 0.93
USP6NLQ92738 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6NLQ92738 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
USP6NLQ92738 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.86■□□□□ 0.93
USP6NLQ92738 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6NLQ92738 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.85■□□□□ 0.93
USP6NLQ92738 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
USP6NLQ92738 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
USP6NLQ92738 AL163051.1-201ENST00000569214 1512 ntBASIC20.85■□□□□ 0.93
USP6NLQ92738 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP6NLQ92738 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP6NLQ92738 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
USP6NLQ92738 FGFR3P6-201ENST00000457012 610 ntBASIC20.85■□□□□ 0.93
USP6NLQ92738 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.85■□□□□ 0.93
USP6NLQ92738 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.85■□□□□ 0.93
USP6NLQ92738 AC139887.3-201ENST00000568585 713 ntBASIC20.85■□□□□ 0.93
USP6NLQ92738 AC005336.2-201ENST00000593183 939 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms