Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SNED1Q8TER0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNED1Q8TER0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SNED1Q8TER0 INTS4P1-201ENST00000438455 1935 ntBASIC22.44■■□□□ 1.18
SNED1Q8TER0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.43■■□□□ 1.18
SNED1Q8TER0 AL163051.1-201ENST00000569214 1512 ntBASIC22.43■■□□□ 1.18
SNED1Q8TER0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
SNED1Q8TER0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SNED1Q8TER0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.43■■□□□ 1.18
SNED1Q8TER0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.43■■□□□ 1.18
SNED1Q8TER0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.43■■□□□ 1.18
SNED1Q8TER0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.43■■□□□ 1.18
SNED1Q8TER0 AC034105.1-201ENST00000563488 319 ntBASIC22.43■■□□□ 1.18
SNED1Q8TER0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.43■■□□□ 1.18
SNED1Q8TER0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC22.43■■□□□ 1.18
SNED1Q8TER0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SNED1Q8TER0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.43■■□□□ 1.18
SNED1Q8TER0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNED1Q8TER0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.42■■□□□ 1.18
SNED1Q8TER0 AC055717.3-201ENST00000622967 595 ntBASIC22.42■■□□□ 1.18
SNED1Q8TER0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNED1Q8TER0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SNED1Q8TER0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNED1Q8TER0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SNED1Q8TER0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNED1Q8TER0 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.41■■□□□ 1.18
SNED1Q8TER0 AC005104.2-201ENST00000427818 678 ntBASIC22.41■■□□□ 1.18
SNED1Q8TER0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SNED1Q8TER0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.41■■□□□ 1.18
SNED1Q8TER0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SNED1Q8TER0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNED1Q8TER0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNED1Q8TER0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.41■■□□□ 1.18
SNED1Q8TER0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SNED1Q8TER0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SNED1Q8TER0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.41■■□□□ 1.18
SNED1Q8TER0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
SNED1Q8TER0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SNED1Q8TER0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 SART3-203ENST00000546611 1184 ntBASIC22.4■■□□□ 1.18
SNED1Q8TER0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 AC021087.4-201ENST00000563761 564 ntBASIC22.4■■□□□ 1.18
SNED1Q8TER0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.4■■□□□ 1.18
SNED1Q8TER0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNED1Q8TER0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms