Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEFF1Q8IYR6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 IL9RP2-201ENST00000423948 1312 ntBASIC18.33■□□□□ 0.53
TMEFF1Q8IYR6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 FAM197Y8-203ENST00000450145 560 ntBASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEFF1Q8IYR6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TMEFF1Q8IYR6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 MIR574-201ENST00000385209 96 ntBASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 PMS2P1-201ENST00000431037 1228 ntBASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 AL773604.1-201ENST00000617417 272 ntBASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEFF1Q8IYR6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms