Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HERC6Q8IVU3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.79
HERC6Q8IVU3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 MIR940-201ENST00000401276 94 ntBASIC19.95■□□□□ 0.78
HERC6Q8IVU3 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 AC008608.2-201ENST00000606089 416 ntBASIC19.95■□□□□ 0.78
HERC6Q8IVU3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 PCDHAC2-203ENST00000615316 3011 ntBASIC19.95■□□□□ 0.78
HERC6Q8IVU3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.95■□□□□ 0.78
HERC6Q8IVU3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.95■□□□□ 0.78
HERC6Q8IVU3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.94■□□□□ 0.78
HERC6Q8IVU3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 AC018712.1-201ENST00000455767 687 ntBASIC19.94■□□□□ 0.78
HERC6Q8IVU3 RPL13AP23-201ENST00000480739 586 ntBASIC19.94■□□□□ 0.78
HERC6Q8IVU3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 TEX21P-204ENST00000641479 1693 ntBASIC19.94■□□□□ 0.78
HERC6Q8IVU3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERC6Q8IVU3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 AC139887.3-201ENST00000568585 713 ntBASIC19.93■□□□□ 0.78
HERC6Q8IVU3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 AL049840.3-201ENST00000602669 611 ntBASIC19.93■□□□□ 0.78
HERC6Q8IVU3 MIR7706-201ENST00000613747 67 ntBASIC19.93■□□□□ 0.78
HERC6Q8IVU3 AC114341.1-201ENST00000618070 349 ntBASIC19.93■□□□□ 0.78
HERC6Q8IVU3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.93■□□□□ 0.78
HERC6Q8IVU3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms