Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 AC096631.2-201ENST00000436136 790 ntBASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CROCCP3Q8IVE0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CROCCP3Q8IVE0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CROCCP3Q8IVE0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms