Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 FEM1AP3-201ENST00000403722 1741 ntBASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 PMS2P7-201ENST00000506558 1336 ntBASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 AL035633.1-201ENST00000406139 838 ntBASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 KRT18P27-201ENST00000427733 1299 ntBASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 AC073648.2-201ENST00000510116 352 ntBASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 AC011467.2-201ENST00000598425 242 ntBASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13DQ5THJ4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.4□□□□□ -0.43
VPS13DQ5THJ4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 AC112777.1-201ENST00000540175 1423 ntBASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 PCDHAC2-203ENST00000615316 3011 ntBASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 KRT18P3-201ENST00000451602 1288 ntBASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.39□□□□□ -0.43
VPS13DQ5THJ4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 AC010327.4-202ENST00000591484 748 ntBASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 AC134684.3-201ENST00000641758 218 ntBASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 AFG3L1P-217ENST00000557444 2447 ntBASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms