Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 AC120057.1-201ENST00000483947 663 ntBASIC19.53■□□□□ 0.72
VARS2Q5ST30 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 AL353692.3-201ENST00000407031 1396 ntBASIC19.53■□□□□ 0.72
VARS2Q5ST30 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARS2Q5ST30 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.53■□□□□ 0.72
VARS2Q5ST30 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARS2Q5ST30 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARS2Q5ST30 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.52■□□□□ 0.72
VARS2Q5ST30 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARS2Q5ST30 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARS2Q5ST30 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARS2Q5ST30 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARS2Q5ST30 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VARS2Q5ST30 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.52■□□□□ 0.72
VARS2Q5ST30 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VARS2Q5ST30 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VARS2Q5ST30 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.52■□□□□ 0.72
VARS2Q5ST30 AC012615.1-201ENST00000565797 1299 ntBASIC19.52■□□□□ 0.72
VARS2Q5ST30 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARS2Q5ST30 AL592071.1-201ENST00000611956 408 ntBASIC19.52■□□□□ 0.72
VARS2Q5ST30 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VARS2Q5ST30 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.52■□□□□ 0.72
VARS2Q5ST30 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VARS2Q5ST30 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARS2Q5ST30 AC009102.3-201ENST00000623118 1491 ntBASIC19.52■□□□□ 0.72
VARS2Q5ST30 MYLKP1-201ENST00000509077 1580 ntBASIC19.52■□□□□ 0.71
VARS2Q5ST30 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
VARS2Q5ST30 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VARS2Q5ST30 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARS2Q5ST30 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VARS2Q5ST30 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARS2Q5ST30 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARS2Q5ST30 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARS2Q5ST30 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARS2Q5ST30 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 FDX1P1-201ENST00000449115 551 ntBASIC19.51■□□□□ 0.71
VARS2Q5ST30 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 GUSBP12-201ENST00000513727 720 ntBASIC19.51■□□□□ 0.71
VARS2Q5ST30 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARS2Q5ST30 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARS2Q5ST30 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARS2Q5ST30 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARS2Q5ST30 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.51■□□□□ 0.71
VARS2Q5ST30 AC112777.1-201ENST00000540175 1423 ntBASIC19.51■□□□□ 0.71
VARS2Q5ST30 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARS2Q5ST30 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARS2Q5ST30 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARS2Q5ST30 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARS2Q5ST30 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
VARS2Q5ST30 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VARS2Q5ST30 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
VARS2Q5ST30 AP000347.1-202ENST00000435868 847 ntBASIC19.5■□□□□ 0.71
VARS2Q5ST30 RN7SL606P-201ENST00000472779 293 ntBASIC19.5■□□□□ 0.71
VARS2Q5ST30 UNC93B7-201ENST00000509439 705 ntBASIC19.5■□□□□ 0.71
VARS2Q5ST30 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
VARS2Q5ST30 AC111152.3-201ENST00000569699 673 ntBASIC19.5■□□□□ 0.71
VARS2Q5ST30 RN7SL510P-201ENST00000581311 263 ntBASIC19.5■□□□□ 0.71
VARS2Q5ST30 AC006538.3-201ENST00000612495 578 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms