Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HIST1H3AP68431 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HIST1H3AP68431 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 MIR149-201ENST00000384879 89 ntBASIC16.14■□□□□ 0.17
HIST1H3AP68431 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 AC104390.1-201ENST00000555663 520 ntBASIC16.14■□□□□ 0.17
HIST1H3AP68431 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 MIR3180-4-201ENST00000582223 153 ntBASIC16.14■□□□□ 0.17
HIST1H3AP68431 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 FAM87A-204ENST00000613235 858 ntBASIC16.14■□□□□ 0.17
HIST1H3AP68431 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HIST1H3AP68431 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H3AP68431 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 AC135776.1-201ENST00000319817 2481 ntBASIC16.13■□□□□ 0.17
HIST1H3AP68431 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 AC090340.1-201ENST00000620778 4980 ntBASIC16.13■□□□□ 0.17
HIST1H3AP68431 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H3AP68431 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HIST1H3AP68431 SDHAP2-201ENST00000455183 2001 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms