Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SPCS3P61009 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.07■□□□□ 0
SPCS3P61009 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPCS3P61009 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
SPCS3P61009 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS3P61009 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS3P61009 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPCS3P61009 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.07■□□□□ 0
SPCS3P61009 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.06■□□□□ 0
SPCS3P61009 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.06■□□□□ 0
SPCS3P61009 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
SPCS3P61009 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SPCS3P61009 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.06■□□□□ 0
SPCS3P61009 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.06■□□□□ 0
SPCS3P61009 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.06■□□□□ 0
SPCS3P61009 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.06■□□□□ 0
SPCS3P61009 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.06■□□□□ 0
SPCS3P61009 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.06■□□□□ 0
SPCS3P61009 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.06■□□□□ 0
SPCS3P61009 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.06■□□□□ 0
SPCS3P61009 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 AC112777.1-201ENST00000540175 1423 ntBASIC15.06■□□□□ 0
SPCS3P61009 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.06■□□□□ 0
SPCS3P61009 MTMR9LP-203ENST00000426597 1545 ntBASIC15.06■□□□□ 0
SPCS3P61009 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.06■□□□□ 0
SPCS3P61009 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPCS3P61009 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPCS3P61009 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.05■□□□□ 0
SPCS3P61009 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.05■□□□□ 0
SPCS3P61009 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.05■□□□□ 0
SPCS3P61009 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPCS3P61009 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SPCS3P61009 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.05■□□□□ -0
SPCS3P61009 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.05■□□□□ -0
SPCS3P61009 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.05■□□□□ -0
SPCS3P61009 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.05■□□□□ -0
SPCS3P61009 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.05■□□□□ -0
SPCS3P61009 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SPCS3P61009 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SPCS3P61009 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.05■□□□□ -0
SPCS3P61009 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.05■□□□□ -0
SPCS3P61009 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
SPCS3P61009 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.05■□□□□ -0
SPCS3P61009 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.05■□□□□ -0
SPCS3P61009 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.05■□□□□ -0
SPCS3P61009 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.05■□□□□ -0
SPCS3P61009 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
SPCS3P61009 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.05■□□□□ -0
SPCS3P61009 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.05■□□□□ -0
SPCS3P61009 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
SPCS3P61009 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 AL162727.3-201ENST00000635661 2787 ntBASIC15.05■□□□□ -0
SPCS3P61009 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.05■□□□□ -0
SPCS3P61009 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SPCS3P61009 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
SPCS3P61009 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
SPCS3P61009 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
SPCS3P61009 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SPCS3P61009 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.04■□□□□ -0
SPCS3P61009 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.04■□□□□ -0
SPCS3P61009 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
SPCS3P61009 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms