Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CXCL12P48061 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CXCL12P48061 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CXCL12P48061 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CXCL12P48061 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.34■□□□□ 0.53
CXCL12P48061 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.34■□□□□ 0.53
CXCL12P48061 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.34■□□□□ 0.53
CXCL12P48061 AL591424.1-201ENST00000442569 1213 ntBASIC18.34■□□□□ 0.53
CXCL12P48061 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.34■□□□□ 0.53
CXCL12P48061 AC021087.4-201ENST00000563761 564 ntBASIC18.34■□□□□ 0.53
CXCL12P48061 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.34■□□□□ 0.53
CXCL12P48061 AC140113.2-201ENST00000604370 208 ntBASIC18.34■□□□□ 0.53
CXCL12P48061 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
CXCL12P48061 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.34■□□□□ 0.53
CXCL12P48061 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CXCL12P48061 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.34■□□□□ 0.53
CXCL12P48061 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL12P48061 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.34■□□□□ 0.53
CXCL12P48061 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.34■□□□□ 0.53
CXCL12P48061 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
CXCL12P48061 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL12P48061 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.33■□□□□ 0.53
CXCL12P48061 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.33■□□□□ 0.53
CXCL12P48061 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL12P48061 INTS4P1-201ENST00000438455 1935 ntBASIC18.33■□□□□ 0.53
CXCL12P48061 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL12P48061 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.33■□□□□ 0.53
CXCL12P48061 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL12P48061 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL12P48061 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL12P48061 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.33■□□□□ 0.53
CXCL12P48061 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.33■□□□□ 0.52
CXCL12P48061 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL12P48061 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL12P48061 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCL12P48061 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL12P48061 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCL12P48061 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL12P48061 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCL12P48061 AC098831.1-202ENST00000438821 336 ntBASIC18.33■□□□□ 0.52
CXCL12P48061 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCL12P48061 KRT18P41-201ENST00000518924 1277 ntBASIC18.33■□□□□ 0.52
CXCL12P48061 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.33■□□□□ 0.52
CXCL12P48061 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL12P48061 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CXCL12P48061 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.33■□□□□ 0.52
CXCL12P48061 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL12P48061 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL12P48061 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CXCL12P48061 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL12P48061 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL12P48061 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 AP005117.1-201ENST00000584346 1413 ntBASIC18.32■□□□□ 0.52
CXCL12P48061 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCL12P48061 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
CXCL12P48061 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.32■□□□□ 0.52
CXCL12P48061 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CXCL12P48061 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCL12P48061 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCL12P48061 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.32■□□□□ 0.52
CXCL12P48061 RPS2P1-201ENST00000434010 821 ntBASIC18.32■□□□□ 0.52
CXCL12P48061 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.32■□□□□ 0.52
CXCL12P48061 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.32■□□□□ 0.52
CXCL12P48061 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.32■□□□□ 0.52
CXCL12P48061 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCL12P48061 MIR3687-2-201ENST00000577708 61 ntBASIC18.32■□□□□ 0.52
CXCL12P48061 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCL12P48061 MIR3687-1-201ENST00000614492 61 ntBASIC18.32■□□□□ 0.52
CXCL12P48061 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCL12P48061 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCL12P48061 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCL12P48061 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CXCL12P48061 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCL12P48061 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CXCL12P48061 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL12P48061 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL12P48061 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL12P48061 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL12P48061 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL12P48061 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms