Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC6A4P31645 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC6A4P31645 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC6A4P31645 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC6A4P31645 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SLC6A4P31645 AC093458.2-201ENST00000623150 629 ntBASIC18.94■□□□□ 0.62
SLC6A4P31645 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC6A4P31645 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC6A4P31645 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SLC6A4P31645 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 AC126763.1-201ENST00000552015 2118 ntBASIC18.94■□□□□ 0.62
SLC6A4P31645 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A4P31645 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A4P31645 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A4P31645 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A4P31645 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SLC6A4P31645 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A4P31645 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A4P31645 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SLC6A4P31645 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A4P31645 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.93■□□□□ 0.62
SLC6A4P31645 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A4P31645 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.93■□□□□ 0.62
SLC6A4P31645 AC069148.1-201ENST00000608741 768 ntBASIC18.93■□□□□ 0.62
SLC6A4P31645 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 AC093503.3-201ENST00000624917 2352 ntBASIC18.93■□□□□ 0.62
SLC6A4P31645 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A4P31645 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A4P31645 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 TNXA-203ENST00000507684 2038 ntBASIC18.93■□□□□ 0.62
SLC6A4P31645 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A4P31645 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SLC6A4P31645 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC6A4P31645 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC6A4P31645 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC6A4P31645 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC6A4P31645 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC6A4P31645 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC6A4P31645 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 AC120498.9-201ENST00000339021 3867 ntBASIC18.92■□□□□ 0.62
SLC6A4P31645 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SLC6A4P31645 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC6A4P31645 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A4P31645 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC6A4P31645 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A4P31645 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SLC6A4P31645 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC6A4P31645 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 AC024563.2-201ENST00000603282 481 ntBASIC18.91■□□□□ 0.62
SLC6A4P31645 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC6A4P31645 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A4P31645 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC6A4P31645 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms