Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 INTS4P1-201ENST00000438455 1935 ntBASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 MIR940-201ENST00000401276 94 ntBASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 AC068472.1-201ENST00000474589 881 ntBASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC163A0A0D9SF12 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 AP001269.4-201ENST00000609611 512 ntBASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC163A0A0D9SF12 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 HEIH-201ENST00000623091 1652 ntBASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 AC141586.3-201ENST00000562166 1838 ntBASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 MIR149-201ENST00000384879 89 ntBASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 AC011467.2-201ENST00000598425 242 ntBASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 AP005117.1-201ENST00000584346 1413 ntBASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC163A0A0D9SF12 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms