Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.19■□□□□ 0.82
HIPK3Q9H422 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
HIPK3Q9H422 BX842568.4-201ENST00000421222 227 ntBASIC20.19■□□□□ 0.82
HIPK3Q9H422 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.19■□□□□ 0.82
HIPK3Q9H422 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.19■□□□□ 0.82
HIPK3Q9H422 RPL13AP23-201ENST00000480739 586 ntBASIC20.19■□□□□ 0.82
HIPK3Q9H422 AC073648.2-201ENST00000510116 352 ntBASIC20.19■□□□□ 0.82
HIPK3Q9H422 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.19■□□□□ 0.82
HIPK3Q9H422 AC139887.3-201ENST00000568585 713 ntBASIC20.19■□□□□ 0.82
HIPK3Q9H422 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.19■□□□□ 0.82
HIPK3Q9H422 AL049840.3-201ENST00000602669 611 ntBASIC20.19■□□□□ 0.82
HIPK3Q9H422 MIR7706-201ENST00000613747 67 ntBASIC20.19■□□□□ 0.82
HIPK3Q9H422 AC068587.9-201ENST00000641814 219 ntBASIC20.19■□□□□ 0.82
HIPK3Q9H422 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.19■□□□□ 0.82
HIPK3Q9H422 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.19■□□□□ 0.82
HIPK3Q9H422 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK3Q9H422 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HIPK3Q9H422 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK3Q9H422 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK3Q9H422 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK3Q9H422 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK3Q9H422 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK3Q9H422 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.18■□□□□ 0.82
HIPK3Q9H422 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK3Q9H422 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.18■□□□□ 0.82
HIPK3Q9H422 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.18■□□□□ 0.82
HIPK3Q9H422 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.18■□□□□ 0.82
HIPK3Q9H422 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
HIPK3Q9H422 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HIPK3Q9H422 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK3Q9H422 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HIPK3Q9H422 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK3Q9H422 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK3Q9H422 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 Z98044.1-201ENST00000632503 1764 ntBASIC20.17■□□□□ 0.82
HIPK3Q9H422 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 FAM220CP-201ENST00000395253 831 ntBASIC20.17■□□□□ 0.82
HIPK3Q9H422 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 ZNF259P1-201ENST00000407656 1365 ntBASIC20.17■□□□□ 0.82
HIPK3Q9H422 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HIPK3Q9H422 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK3Q9H422 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK3Q9H422 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK3Q9H422 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK3Q9H422 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK3Q9H422 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK3Q9H422 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK3Q9H422 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 AL355877.3-201ENST00000622820 899 ntBASIC20.16■□□□□ 0.82
HIPK3Q9H422 FAM215A-202ENST00000632077 792 ntBASIC20.16■□□□□ 0.82
HIPK3Q9H422 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK3Q9H422 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.16■□□□□ 0.82
HIPK3Q9H422 KRT8P50-201ENST00000562022 1438 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms