Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 AP002414.1-201ENST00000391405 1147 ntBASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 ELK2BP-201ENST00000415014 1224 ntBASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 AC109322.1-201ENST00000524499 1264 ntBASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 PDPK2P-202ENST00000562415 1191 ntBASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 CLDN5-201ENST00000403084 2357 ntBASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN3Q9BTN0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 RCC2P3-201ENST00000418112 1537 ntBASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 TFAMP1-201ENST00000412727 736 ntBASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 AP005018.1-201ENST00000525475 301 ntBASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN3Q9BTN0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRFN3Q9BTN0 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.39■□□□□ 0.54
LRFN3Q9BTN0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRFN3Q9BTN0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.39■□□□□ 0.54
LRFN3Q9BTN0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.39■□□□□ 0.54
LRFN3Q9BTN0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 AC073621.1-201ENST00000392730 636 ntBASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 TSPY16P-201ENST00000449843 468 ntBASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 AL138831.2-201ENST00000606564 490 ntBASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN3Q9BTN0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN3Q9BTN0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN3Q9BTN0 MIR661-201ENST00000384842 89 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms