Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 AC026471.5-201ENST00000615068 467 ntBASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 AC068587.9-201ENST00000641814 219 ntBASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H2AAQ96QV6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 MESTP1-201ENST00000404287 994 ntBASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 CRYGFP-201ENST00000418459 633 ntBASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 MFAP1P1-201ENST00000442257 1255 ntBASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H2AAQ96QV6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 RCC2P3-201ENST00000418112 1537 ntBASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 AC008550.1-201ENST00000511500 884 ntBASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H2AAQ96QV6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 AC090164.3-201ENST00000610780 2143 ntBASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 AC096733.2-201ENST00000609937 1394 ntBASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms