Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 MIR4497-201ENST00000583208 89 ntBASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 AC018754.1-201ENST00000607486 925 ntBASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 AL021368.1-201ENST00000607490 540 ntBASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 AC093648.1-201ENST00000623546 606 ntBASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 SDHAP1-207ENST00000440850 2000 ntBASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A3Q96HJ5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 AC006455.6-201ENST00000426192 893 ntBASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 SETP8-201ENST00000435341 628 ntBASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 TRIM36-IT1-201ENST00000503723 881 ntBASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 AL160286.2-201ENST00000567150 934 ntBASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 AC079414.2-201ENST00000567157 1104 ntBASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 AC026471.5-201ENST00000615068 467 ntBASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 AC012653.2-201ENST00000621880 420 ntBASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 AC131212.4-201ENST00000623606 975 ntBASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.79■□□□□ 0.28
MS4A3Q96HJ5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 AC106820.2-201ENST00000563775 3264 ntBASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 AC012313.1-201ENST00000593393 3059 ntBASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 AL355355.2-201ENST00000442321 338 ntBASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 AL031985.4-201ENST00000642138 673 ntBASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A3Q96HJ5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MS4A3Q96HJ5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms