Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 AC098818.2-201ENST00000564925 2320 ntBASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 MIR662-201ENST00000384847 95 ntBASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMARCD1Q96GM5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMARCD1Q96GM5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 AL162741.1-201ENST00000565563 1558 ntBASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.42■□□□□ 0.7
SMARCD1Q96GM5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 TNXA-203ENST00000507684 2038 ntBASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCD1Q96GM5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.4■□□□□ 0.7
SMARCD1Q96GM5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms