Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 AC103702.1-201ENST00000548801 2630 ntBASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LYSMD2Q8IV50 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LYSMD2Q8IV50 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 C2orf69P4-201ENST00000565394 541 ntBASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 CYP2T3P-201ENST00000601990 817 ntBASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 TFP1-202ENST00000475455 1573 ntBASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD2Q8IV50 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 PCDHA1-201ENST00000378133 2726 ntBASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD2Q8IV50 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms