Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 KRT8P50-201ENST00000562022 1438 ntBASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 AC117947.1-201ENST00000427448 529 ntBASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 KRT18P41-201ENST00000518924 1277 ntBASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYSMD3Q7Z3D4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 WIZP1-201ENST00000531444 2299 ntBASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 AL138781.2-201ENST00000617896 1843 ntBASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.58■□□□□ 0.57
LYSMD3Q7Z3D4 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 AP000523.1-201ENST00000398242 1049 ntBASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 AC126763.1-201ENST00000552015 2118 ntBASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYSMD3Q7Z3D4 KRT8P7-201ENST00000533003 1432 ntBASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 AC112777.1-201ENST00000540175 1423 ntBASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 SEC1P-202ENST00000473944 940 ntBASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 YBX1P2-201ENST00000489612 999 ntBASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 AL441883.1-201ENST00000566170 1045 ntBASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYSMD3Q7Z3D4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 AC104076.2-201ENST00000448912 469 ntBASIC18.56■□□□□ 0.56
LYSMD3Q7Z3D4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms