Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.87■□□□□ 0.77
CNKSR3Q6P9H4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR3Q6P9H4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 MIR940-201ENST00000401276 94 ntBASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 HNRNPDP1-201ENST00000439535 754 ntBASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 AC068472.1-201ENST00000474589 881 ntBASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 AC009533.2-201ENST00000543664 586 ntBASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR3Q6P9H4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 AC092183.1-201ENST00000469884 875 ntBASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 AP001269.4-201ENST00000609611 512 ntBASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 AC116407.3-201ENST00000623905 1129 ntBASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR3Q6P9H4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNKSR3Q6P9H4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms