Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 PCED1CP-201ENST00000419887 785 ntBASIC19.41■□□□□ 0.7
RNF43Q68DV7 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 YBX1P2-201ENST00000489612 999 ntBASIC19.41■□□□□ 0.7
RNF43Q68DV7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 NEK4P2-201ENST00000580004 1012 ntBASIC19.41■□□□□ 0.7
RNF43Q68DV7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF43Q68DV7 NOC2LP2-201ENST00000407594 1944 ntBASIC19.41■□□□□ 0.7
RNF43Q68DV7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF43Q68DV7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF43Q68DV7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF43Q68DV7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF43Q68DV7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RNF43Q68DV7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 AC141586.3-201ENST00000562166 1838 ntBASIC19.4■□□□□ 0.7
RNF43Q68DV7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF43Q68DV7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RNF43Q68DV7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 AL161938.1-201ENST00000569833 2180 ntBASIC19.4■□□□□ 0.7
RNF43Q68DV7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF43Q68DV7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RNF43Q68DV7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF43Q68DV7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF43Q68DV7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
RNF43Q68DV7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.39■□□□□ 0.7
RNF43Q68DV7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
RNF43Q68DV7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF43Q68DV7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.7
RNF43Q68DV7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
RNF43Q68DV7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF43Q68DV7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF43Q68DV7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.39■□□□□ 0.69
RNF43Q68DV7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF43Q68DV7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF43Q68DV7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF43Q68DV7 CR769767.2-201ENST00000622735 460 ntBASIC19.39■□□□□ 0.69
RNF43Q68DV7 IER3-202ENST00000376377 1350 ntBASIC19.39■□□□□ 0.69
RNF43Q68DV7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 GPAT2P1-201ENST00000444924 1672 ntBASIC19.39■□□□□ 0.69
RNF43Q68DV7 FEM1AP3-201ENST00000403722 1741 ntBASIC19.39■□□□□ 0.69
RNF43Q68DV7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF43Q68DV7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF43Q68DV7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF43Q68DV7 AL023284.2-201ENST00000405850 579 ntBASIC19.38■□□□□ 0.69
RNF43Q68DV7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF43Q68DV7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms