Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 TERF1P1-201ENST00000311003 1181 ntBASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 AC024243.1-201ENST00000609234 778 ntBASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 AC135050.7-201ENST00000624508 2218 ntBASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 AC073508.3-201ENST00000619697 1419 ntBASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 SDHAP2-201ENST00000455183 2001 ntBASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN20Q4JDL3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 LINC01023-201ENST00000606054 436 ntBASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 AC010240.3-201ENST00000607688 395 ntBASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 ESPNP-201ENST00000270691 2015 ntBASIC19.46■□□□□ 0.71
PTPN20Q4JDL3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 AC005521.1-201ENST00000393351 872 ntBASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms