Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 FEM1AP3-201ENST00000403722 1741 ntBASIC27.68■■■□□ 2.02
KDM5CP41229 AC021087.4-201ENST00000563761 564 ntBASIC27.68■■■□□ 2.02
KDM5CP41229 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC27.68■■■□□ 2.02
KDM5CP41229 AC027601.4-201ENST00000611259 610 ntBASIC27.68■■■□□ 2.02
KDM5CP41229 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC27.68■■■□□ 2.02
KDM5CP41229 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
KDM5CP41229 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
KDM5CP41229 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
KDM5CP41229 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC27.67■■■□□ 2.02
KDM5CP41229 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC27.67■■■□□ 2.02
KDM5CP41229 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
KDM5CP41229 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC27.67■■■□□ 2.02
KDM5CP41229 YBX2P1-201ENST00000394192 760 ntBASIC27.67■■■□□ 2.02
KDM5CP41229 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC27.67■■■□□ 2.02
KDM5CP41229 Z83851.2-201ENST00000609564 659 ntBASIC27.67■■■□□ 2.02
KDM5CP41229 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
KDM5CP41229 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
KDM5CP41229 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
KDM5CP41229 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
KDM5CP41229 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
KDM5CP41229 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
KDM5CP41229 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC27.67■■■□□ 2.02
KDM5CP41229 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
KDM5CP41229 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC27.66■■■□□ 2.02
KDM5CP41229 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
KDM5CP41229 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC27.66■■■□□ 2.02
KDM5CP41229 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
KDM5CP41229 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
KDM5CP41229 MTDHP3-201ENST00000594186 672 ntBASIC27.66■■■□□ 2.02
KDM5CP41229 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
KDM5CP41229 ME2-218ENST00000640965 2476 ntTSL 5 BASIC27.66■■■□□ 2.02
KDM5CP41229 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
KDM5CP41229 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC27.66■■■□□ 2.02
KDM5CP41229 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
KDM5CP41229 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC27.66■■■□□ 2.02
KDM5CP41229 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
KDM5CP41229 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
KDM5CP41229 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC27.65■■■□□ 2.02
KDM5CP41229 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
KDM5CP41229 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC27.65■■■□□ 2.02
KDM5CP41229 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC27.65■■■□□ 2.02
KDM5CP41229 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC27.65■■■□□ 2.02
KDM5CP41229 AC025062.2-201ENST00000605477 670 ntBASIC27.65■■■□□ 2.02
KDM5CP41229 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC27.65■■■□□ 2.02
KDM5CP41229 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
KDM5CP41229 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KDM5CP41229 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC27.65■■■□□ 2.02
KDM5CP41229 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KDM5CP41229 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KDM5CP41229 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KDM5CP41229 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
KDM5CP41229 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
KDM5CP41229 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
KDM5CP41229 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KDM5CP41229 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KDM5CP41229 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC27.65■■■□□ 2.02
KDM5CP41229 RBSN-204ENST00000449050 903 ntTSL 2 BASIC27.65■■■□□ 2.02
KDM5CP41229 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
KDM5CP41229 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC27.65■■■□□ 2.02
KDM5CP41229 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC27.65■■■□□ 2.02
KDM5CP41229 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC27.65■■■□□ 2.02
KDM5CP41229 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC27.64■■■□□ 2.02
KDM5CP41229 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
KDM5CP41229 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
KDM5CP41229 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC27.64■■■□□ 2.01
KDM5CP41229 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
KDM5CP41229 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC27.64■■■□□ 2.01
KDM5CP41229 PNMT-203ENST00000581428 677 ntTSL 2 BASIC27.64■■■□□ 2.01
KDM5CP41229 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC27.64■■■□□ 2.01
KDM5CP41229 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC27.64■■■□□ 2.01
KDM5CP41229 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC27.64■■■□□ 2.01
KDM5CP41229 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC27.63■■■□□ 2.01
KDM5CP41229 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
KDM5CP41229 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
KDM5CP41229 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM5CP41229 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM5CP41229 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC27.63■■■□□ 2.01
KDM5CP41229 AC022898.2-201ENST00000616822 1312 ntBASIC27.63■■■□□ 2.01
KDM5CP41229 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM5CP41229 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
KDM5CP41229 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM5CP41229 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM5CP41229 MIR940-201ENST00000401276 94 ntBASIC27.63■■■□□ 2.01
KDM5CP41229 IMP4-203ENST00000409935 958 ntTSL 5 BASIC27.63■■■□□ 2.01
KDM5CP41229 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC27.63■■■□□ 2.01
KDM5CP41229 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC27.63■■■□□ 2.01
KDM5CP41229 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC27.63■■■□□ 2.01
KDM5CP41229 AC011467.2-201ENST00000598425 242 ntBASIC27.63■■■□□ 2.01
KDM5CP41229 AL139424.1-201ENST00000607572 797 ntBASIC27.63■■■□□ 2.01
KDM5CP41229 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC27.63■■■□□ 2.01
KDM5CP41229 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM5CP41229 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM5CP41229 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC27.63■■■□□ 2.01
KDM5CP41229 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
KDM5CP41229 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
KDM5CP41229 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC27.62■■■□□ 2.01
KDM5CP41229 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC27.62■■■□□ 2.01
KDM5CP41229 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
KDM5CP41229 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC27.62■■■□□ 2.01
KDM5CP41229 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms