Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.59■□□□□ 0.57
LSP1P33241 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.59■□□□□ 0.57
LSP1P33241 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.59■□□□□ 0.57
LSP1P33241 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.59■□□□□ 0.57
LSP1P33241 RARRES2P6-201ENST00000567333 442 ntBASIC18.59■□□□□ 0.57
LSP1P33241 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LSP1P33241 PCDH8P1-201ENST00000428983 2773 ntBASIC18.59■□□□□ 0.57
LSP1P33241 AL162727.3-201ENST00000635661 2787 ntBASIC18.59■□□□□ 0.57
LSP1P33241 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LSP1P33241 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSP1P33241 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSP1P33241 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSP1P33241 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSP1P33241 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSP1P33241 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSP1P33241 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSP1P33241 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
LSP1P33241 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSP1P33241 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSP1P33241 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.59■□□□□ 0.57
LSP1P33241 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSP1P33241 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.58■□□□□ 0.57
LSP1P33241 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSP1P33241 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LSP1P33241 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LSP1P33241 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.58■□□□□ 0.57
LSP1P33241 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSP1P33241 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSP1P33241 OR6D1P-202ENST00000641007 5290 ntBASIC18.58■□□□□ 0.57
LSP1P33241 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSP1P33241 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
LSP1P33241 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LSP1P33241 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSP1P33241 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.58■□□□□ 0.56
LSP1P33241 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.58■□□□□ 0.56
LSP1P33241 MIR5787-201ENST00000611784 55 ntBASIC18.58■□□□□ 0.56
LSP1P33241 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.58■□□□□ 0.56
LSP1P33241 MIR6821-201ENST00000617625 74 ntBASIC18.58■□□□□ 0.56
LSP1P33241 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.58■□□□□ 0.56
LSP1P33241 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LSP1P33241 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSP1P33241 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.58■□□□□ 0.56
LSP1P33241 KRT8P45-201ENST00000414328 1447 ntBASIC18.57■□□□□ 0.56
LSP1P33241 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LSP1P33241 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.57■□□□□ 0.56
LSP1P33241 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LSP1P33241 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.57■□□□□ 0.56
LSP1P33241 TSPY23P-201ENST00000440136 739 ntBASIC18.57■□□□□ 0.56
LSP1P33241 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.57■□□□□ 0.56
LSP1P33241 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LSP1P33241 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LSP1P33241 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSP1P33241 AL391005.1-201ENST00000623953 2435 ntBASIC18.57■□□□□ 0.56
LSP1P33241 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSP1P33241 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
LSP1P33241 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
LSP1P33241 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSP1P33241 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSP1P33241 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSP1P33241 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSP1P33241 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSP1P33241 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.56■□□□□ 0.56
LSP1P33241 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.56■□□□□ 0.56
LSP1P33241 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSP1P33241 AP006587.1-201ENST00000534129 1502 ntBASIC18.56■□□□□ 0.56
LSP1P33241 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LSP1P33241 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LSP1P33241 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
LSP1P33241 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LSP1P33241 AC034268.1-201ENST00000441047 882 ntBASIC18.56■□□□□ 0.56
LSP1P33241 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.56■□□□□ 0.56
LSP1P33241 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.56■□□□□ 0.56
LSP1P33241 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.56■□□□□ 0.56
LSP1P33241 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.56■□□□□ 0.56
LSP1P33241 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.56■□□□□ 0.56
LSP1P33241 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.56■□□□□ 0.56
LSP1P33241 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.56■□□□□ 0.56
LSP1P33241 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.56■□□□□ 0.56
LSP1P33241 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSP1P33241 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LSP1P33241 PCDHB19P-201ENST00000570871 2371 ntBASIC18.56■□□□□ 0.56
LSP1P33241 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSP1P33241 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LSP1P33241 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms