Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.71■□□□□ 0.91
RARBP10826 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RARBP10826 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.71■□□□□ 0.91
RARBP10826 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.71■□□□□ 0.91
RARBP10826 TREX1-205ENST00000625293 1783 ntBASIC20.71■□□□□ 0.91
RARBP10826 IL9RP2-201ENST00000423948 1312 ntBASIC20.71■□□□□ 0.91
RARBP10826 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARBP10826 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARBP10826 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARBP10826 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARBP10826 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.7■□□□□ 0.9
RARBP10826 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RARBP10826 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.7■□□□□ 0.9
RARBP10826 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RARBP10826 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RARBP10826 FAM197Y8-203ENST00000450145 560 ntBASIC20.7■□□□□ 0.9
RARBP10826 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RARBP10826 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RARBP10826 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.7■□□□□ 0.9
RARBP10826 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARBP10826 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RARBP10826 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARBP10826 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RARBP10826 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARBP10826 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARBP10826 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RARBP10826 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARBP10826 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RARBP10826 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.69■□□□□ 0.9
RARBP10826 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RARBP10826 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARBP10826 RNA5SP419-201ENST00000515908 135 ntBASIC20.69■□□□□ 0.9
RARBP10826 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.69■□□□□ 0.9
RARBP10826 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RARBP10826 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARBP10826 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.69■□□□□ 0.9
RARBP10826 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.69■□□□□ 0.9
RARBP10826 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARBP10826 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.69■□□□□ 0.9
RARBP10826 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
RARBP10826 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RARBP10826 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.68■□□□□ 0.9
RARBP10826 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.68■□□□□ 0.9
RARBP10826 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 MIR574-201ENST00000385209 96 ntBASIC20.68■□□□□ 0.9
RARBP10826 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.68■□□□□ 0.9
RARBP10826 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.68■□□□□ 0.9
RARBP10826 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.68■□□□□ 0.9
RARBP10826 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.68■□□□□ 0.9
RARBP10826 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.68■□□□□ 0.9
RARBP10826 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 AL591684.3-201ENST00000605187 298 ntBASIC20.68■□□□□ 0.9
RARBP10826 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 AC139530.3-201ENST00000620344 690 ntBASIC20.68■□□□□ 0.9
RARBP10826 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RARBP10826 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.68■□□□□ 0.9
RARBP10826 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.68■□□□□ 0.9
RARBP10826 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.68■□□□□ 0.9
RARBP10826 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RARBP10826 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RARBP10826 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RARBP10826 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RARBP10826 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.67■□□□□ 0.9
RARBP10826 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 KRT18P13-201ENST00000400056 1290 ntBASIC20.67■□□□□ 0.9
RARBP10826 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RARBP10826 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.67■□□□□ 0.9
RARBP10826 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms