Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.74■□□□□ 0.75
O00370 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.74■□□□□ 0.75
O00370 AC141257.4-201ENST00000634557 245 ntBASIC19.74■□□□□ 0.75
O00370 AC136944.6-201ENST00000634818 245 ntBASIC19.74■□□□□ 0.75
O00370 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
O00370 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.74■□□□□ 0.75
O00370 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 HOXB1-202ENST00000577092 1414 ntBASIC19.74■□□□□ 0.75
O00370 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.74■□□□□ 0.75
O00370 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.73■□□□□ 0.75
O00370 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
O00370 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
O00370 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
O00370 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
O00370 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.73■□□□□ 0.75
O00370 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.73■□□□□ 0.75
O00370 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.73■□□□□ 0.75
O00370 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.73■□□□□ 0.75
O00370 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.73■□□□□ 0.75
O00370 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.73■□□□□ 0.75
O00370 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.73■□□□□ 0.75
O00370 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
O00370 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.73■□□□□ 0.75
O00370 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
O00370 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.73■□□□□ 0.75
O00370 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
O00370 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
O00370 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
O00370 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
O00370 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
O00370 LIN28AP1-201ENST00000429574 405 ntBASIC19.72■□□□□ 0.75
O00370 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
O00370 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
O00370 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
O00370 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
O00370 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.72■□□□□ 0.75
O00370 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.72■□□□□ 0.75
O00370 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.72■□□□□ 0.75
O00370 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 NEK4P2-201ENST00000580004 1012 ntBASIC19.72■□□□□ 0.75
O00370 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
O00370 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.72■□□□□ 0.75
O00370 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.72■□□□□ 0.75
O00370 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.72■□□□□ 0.75
O00370 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.72■□□□□ 0.75
O00370 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.72■□□□□ 0.75
O00370 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.72■□□□□ 0.75
O00370 AC126763.1-201ENST00000552015 2118 ntBASIC19.72■□□□□ 0.75
O00370 AC090164.3-201ENST00000610780 2143 ntBASIC19.72■□□□□ 0.75
O00370 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
O00370 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.71■□□□□ 0.75
O00370 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.71■□□□□ 0.75
O00370 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
O00370 AC112777.1-201ENST00000540175 1423 ntBASIC19.71■□□□□ 0.75
O00370 KRT8P50-201ENST00000562022 1438 ntBASIC19.71■□□□□ 0.75
O00370 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.71■□□□□ 0.75
O00370 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms