Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX2IPQ9Y2D8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.92■□□□□ 0.78
SSX2IPQ9Y2D8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SSX2IPQ9Y2D8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX2IPQ9Y2D8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSX2IPQ9Y2D8 HOXB1-202ENST00000577092 1414 ntBASIC19.92■□□□□ 0.78
SSX2IPQ9Y2D8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SSX2IPQ9Y2D8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.92■□□□□ 0.78
SSX2IPQ9Y2D8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SSX2IPQ9Y2D8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 KRT18P23-201ENST00000435622 1283 ntBASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 AL391807.1-203ENST00000604392 2365 ntBASIC19.91■□□□□ 0.78
SSX2IPQ9Y2D8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 CHCHD2P8-201ENST00000429873 447 ntBASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 AC079602.3-201ENST00000623931 403 ntBASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 AL512353.2-201ENST00000448759 1962 ntBASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX2IPQ9Y2D8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.89■□□□□ 0.78
SSX2IPQ9Y2D8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SSX2IPQ9Y2D8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 RCC2P3-201ENST00000418112 1537 ntBASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 AC104390.1-201ENST00000555663 520 ntBASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 AC012313.10-201ENST00000623509 926 ntBASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX2IPQ9Y2D8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX2IPQ9Y2D8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms