Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTFDC1Q9BY42 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 DDT-203ENST00000403754 569 ntTSL 3 BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 DDT-206ENST00000430101 573 ntTSL 2 BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 AF186996.4-201ENST00000467186 377 ntBASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 KRT18P58-201ENST00000527480 1120 ntBASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 AC106730.1-201ENST00000566722 1090 ntBASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RTFDC1Q9BY42 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 RNPS1P1-201ENST00000507437 918 ntBASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 AC243591.1-201ENST00000452967 1364 ntBASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTFDC1Q9BY42 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 AC132008.2-207ENST00000454517 770 ntBASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 ABBA01031661.1-201ENST00000634362 1253 ntBASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 AL163051.1-201ENST00000569214 1512 ntBASIC22.47■■□□□ 1.19
RTFDC1Q9BY42 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 AC113404.2-201ENST00000507884 177 ntBASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 AC008608.2-201ENST00000606089 416 ntBASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTFDC1Q9BY42 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
RTFDC1Q9BY42 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RTFDC1Q9BY42 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms