Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.56■□□□□ 0.56
CPNE1Q99829 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE1Q99829 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE1Q99829 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE1Q99829 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE1Q99829 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE1Q99829 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE1Q99829 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE1Q99829 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE1Q99829 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CPNE1Q99829 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE1Q99829 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE1Q99829 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE1Q99829 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE1Q99829 AP000593.1-201ENST00000393668 712 ntBASIC18.55■□□□□ 0.56
CPNE1Q99829 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE1Q99829 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.55■□□□□ 0.56
CPNE1Q99829 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE1Q99829 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.55■□□□□ 0.56
CPNE1Q99829 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CPNE1Q99829 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE1Q99829 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE1Q99829 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE1Q99829 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.55■□□□□ 0.56
CPNE1Q99829 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE1Q99829 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE1Q99829 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE1Q99829 AC096733.2-201ENST00000609937 1394 ntBASIC18.55■□□□□ 0.56
CPNE1Q99829 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.55■□□□□ 0.56
CPNE1Q99829 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CPNE1Q99829 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE1Q99829 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.54■□□□□ 0.56
CPNE1Q99829 ESPNP-201ENST00000270691 2015 ntBASIC18.54■□□□□ 0.56
CPNE1Q99829 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE1Q99829 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.54■□□□□ 0.56
CPNE1Q99829 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CPNE1Q99829 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CPNE1Q99829 MIR564-202ENST00000385049 94 ntBASIC18.54■□□□□ 0.56
CPNE1Q99829 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CPNE1Q99829 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE1Q99829 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.54■□□□□ 0.56
CPNE1Q99829 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 FAM197Y4-202ENST00000622692 608 ntBASIC18.54■□□□□ 0.56
CPNE1Q99829 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE1Q99829 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE1Q99829 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CPNE1Q99829 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE1Q99829 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CPNE1Q99829 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE1Q99829 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.54■□□□□ 0.56
CPNE1Q99829 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE1Q99829 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CPNE1Q99829 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CPNE1Q99829 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CPNE1Q99829 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE1Q99829 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE1Q99829 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CPNE1Q99829 AL023284.2-201ENST00000405850 579 ntBASIC18.53■□□□□ 0.56
CPNE1Q99829 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE1Q99829 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.53■□□□□ 0.56
CPNE1Q99829 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE1Q99829 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE1Q99829 AL135905.2-201ENST00000584934 1404 ntBASIC18.53■□□□□ 0.56
CPNE1Q99829 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CPNE1Q99829 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE1Q99829 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CPNE1Q99829 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE1Q99829 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CPNE1Q99829 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE1Q99829 AC067852.2-201ENST00000590513 2313 ntBASIC18.52■□□□□ 0.56
CPNE1Q99829 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE1Q99829 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CPNE1Q99829 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE1Q99829 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.52■□□□□ 0.56
CPNE1Q99829 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CPNE1Q99829 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms