Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.16■□□□□ 0.18
COL12A1Q99715 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL12A1Q99715 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.16■□□□□ 0.18
COL12A1Q99715 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL12A1Q99715 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL12A1Q99715 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.15■□□□□ 0.18
COL12A1Q99715 AC245100.3-201ENST00000441281 285 ntBASIC16.15■□□□□ 0.18
COL12A1Q99715 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.15■□□□□ 0.18
COL12A1Q99715 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.15■□□□□ 0.18
COL12A1Q99715 AL078644.1-201ENST00000609881 752 ntBASIC16.15■□□□□ 0.18
COL12A1Q99715 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL12A1Q99715 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
COL12A1Q99715 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 ELL2P1-201ENST00000413990 1906 ntBASIC16.15■□□□□ 0.18
COL12A1Q99715 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL12A1Q99715 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.15■□□□□ 0.18
COL12A1Q99715 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.15■□□□□ 0.18
COL12A1Q99715 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 AL353692.3-201ENST00000407031 1396 ntBASIC16.15■□□□□ 0.18
COL12A1Q99715 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL12A1Q99715 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL12A1Q99715 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL12A1Q99715 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
COL12A1Q99715 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
COL12A1Q99715 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 AC015922.1-201ENST00000421102 1152 ntBASIC16.15■□□□□ 0.18
COL12A1Q99715 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL12A1Q99715 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.15■□□□□ 0.18
COL12A1Q99715 AP003733.1-201ENST00000491725 852 ntBASIC16.15■□□□□ 0.18
COL12A1Q99715 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.15■□□□□ 0.18
COL12A1Q99715 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL12A1Q99715 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.15■□□□□ 0.18
COL12A1Q99715 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL12A1Q99715 AC009237.14-201ENST00000609975 1594 ntBASIC16.15■□□□□ 0.18
COL12A1Q99715 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COL12A1Q99715 AC002310.6-201ENST00000624451 1377 ntBASIC16.14■□□□□ 0.17
COL12A1Q99715 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.14■□□□□ 0.17
COL12A1Q99715 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COL12A1Q99715 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
COL12A1Q99715 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
COL12A1Q99715 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.14■□□□□ 0.17
COL12A1Q99715 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.14■□□□□ 0.17
COL12A1Q99715 C20orf181-201ENST00000623918 480 ntBASIC16.14■□□□□ 0.17
COL12A1Q99715 AC092865.6-201ENST00000642101 219 ntBASIC16.14■□□□□ 0.17
COL12A1Q99715 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.14■□□□□ 0.17
COL12A1Q99715 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.14■□□□□ 0.17
COL12A1Q99715 KRT8P7-201ENST00000533003 1432 ntBASIC16.14■□□□□ 0.17
COL12A1Q99715 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COL12A1Q99715 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.14■□□□□ 0.17
COL12A1Q99715 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.14■□□□□ 0.17
COL12A1Q99715 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.14■□□□□ 0.17
COL12A1Q99715 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COL12A1Q99715 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.14■□□□□ 0.17
COL12A1Q99715 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL12A1Q99715 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.14■□□□□ 0.17
COL12A1Q99715 TP73-AS1-210ENST00000637775 1455 ntBASIC16.14■□□□□ 0.17
COL12A1Q99715 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL12A1Q99715 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.13■□□□□ 0.17
COL12A1Q99715 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL12A1Q99715 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL12A1Q99715 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.13■□□□□ 0.17
COL12A1Q99715 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL12A1Q99715 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
COL12A1Q99715 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.13■□□□□ 0.17
COL12A1Q99715 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
COL12A1Q99715 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.13■□□□□ 0.17
COL12A1Q99715 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.13■□□□□ 0.17
COL12A1Q99715 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.13■□□□□ 0.17
COL12A1Q99715 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL12A1Q99715 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.13■□□□□ 0.17
COL12A1Q99715 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL12A1Q99715 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL12A1Q99715 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL12A1Q99715 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
COL12A1Q99715 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.13■□□□□ 0.17
COL12A1Q99715 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.13■□□□□ 0.17
COL12A1Q99715 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL12A1Q99715 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL12A1Q99715 AC087641.1-201ENST00000557561 1021 ntBASIC16.13■□□□□ 0.17
COL12A1Q99715 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.13■□□□□ 0.17
COL12A1Q99715 AC007375.3-201ENST00000600936 2314 ntBASIC16.13■□□□□ 0.17
COL12A1Q99715 HEIH-201ENST00000623091 1652 ntBASIC16.13■□□□□ 0.17
COL12A1Q99715 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms