Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.68■□□□□ 0.58
SHDQ96IW2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.68■□□□□ 0.58
SHDQ96IW2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.68■□□□□ 0.58
SHDQ96IW2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.68■□□□□ 0.58
SHDQ96IW2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.68■□□□□ 0.58
SHDQ96IW2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.68■□□□□ 0.58
SHDQ96IW2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SHDQ96IW2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHDQ96IW2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.68■□□□□ 0.58
SHDQ96IW2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.68■□□□□ 0.58
SHDQ96IW2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.67■□□□□ 0.58
SHDQ96IW2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHDQ96IW2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.67■□□□□ 0.58
SHDQ96IW2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.67■□□□□ 0.58
SHDQ96IW2 TP73-AS1-210ENST00000637775 1455 ntBASIC18.67■□□□□ 0.58
SHDQ96IW2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHDQ96IW2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SHDQ96IW2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.67■□□□□ 0.58
SHDQ96IW2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHDQ96IW2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHDQ96IW2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.67■□□□□ 0.58
SHDQ96IW2 AL591424.1-201ENST00000442569 1213 ntBASIC18.67■□□□□ 0.58
SHDQ96IW2 AC009533.2-201ENST00000543664 586 ntBASIC18.67■□□□□ 0.58
SHDQ96IW2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.67■□□□□ 0.58
SHDQ96IW2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.67■□□□□ 0.58
SHDQ96IW2 AC145285.3-201ENST00000564603 959 ntBASIC18.67■□□□□ 0.58
SHDQ96IW2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.67■□□□□ 0.58
SHDQ96IW2 FAM197Y3-203ENST00000618346 717 ntBASIC18.67■□□□□ 0.58
SHDQ96IW2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHDQ96IW2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.67■□□□□ 0.58
SHDQ96IW2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.67■□□□□ 0.58
SHDQ96IW2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.67■□□□□ 0.58
SHDQ96IW2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHDQ96IW2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHDQ96IW2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHDQ96IW2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.66■□□□□ 0.58
SHDQ96IW2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.66■□□□□ 0.58
SHDQ96IW2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SHDQ96IW2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.66■□□□□ 0.58
SHDQ96IW2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.66■□□□□ 0.58
SHDQ96IW2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.66■□□□□ 0.58
SHDQ96IW2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SHDQ96IW2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SHDQ96IW2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.66■□□□□ 0.58
SHDQ96IW2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.66■□□□□ 0.58
SHDQ96IW2 AC113404.2-201ENST00000507884 177 ntBASIC18.66■□□□□ 0.58
SHDQ96IW2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.66■□□□□ 0.58
SHDQ96IW2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.66■□□□□ 0.58
SHDQ96IW2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.66■□□□□ 0.58
SHDQ96IW2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 AC083906.6-201ENST00000641366 219 ntBASIC18.66■□□□□ 0.58
SHDQ96IW2 AC079781.4-201ENST00000641908 219 ntBASIC18.66■□□□□ 0.58
SHDQ96IW2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHDQ96IW2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHDQ96IW2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SHDQ96IW2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHDQ96IW2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHDQ96IW2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHDQ96IW2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
SHDQ96IW2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHDQ96IW2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.65■□□□□ 0.58
SHDQ96IW2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHDQ96IW2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHDQ96IW2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SHDQ96IW2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.65■□□□□ 0.58
SHDQ96IW2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.65■□□□□ 0.58
SHDQ96IW2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.65■□□□□ 0.58
SHDQ96IW2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.65■□□□□ 0.58
SHDQ96IW2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHDQ96IW2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHDQ96IW2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.65■□□□□ 0.58
SHDQ96IW2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHDQ96IW2 AC112777.1-201ENST00000540175 1423 ntBASIC18.65■□□□□ 0.58
SHDQ96IW2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHDQ96IW2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SHDQ96IW2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHDQ96IW2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHDQ96IW2 Z98044.1-201ENST00000632503 1764 ntBASIC18.64■□□□□ 0.57
SHDQ96IW2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.64■□□□□ 0.57
SHDQ96IW2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SHDQ96IW2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHDQ96IW2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.64■□□□□ 0.57
SHDQ96IW2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.64■□□□□ 0.57
SHDQ96IW2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.64■□□□□ 0.57
SHDQ96IW2 UPF3AP3-201ENST00000420996 769 ntBASIC18.64■□□□□ 0.57
SHDQ96IW2 HNRNPDP1-201ENST00000439535 754 ntBASIC18.64■□□□□ 0.57
SHDQ96IW2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms