Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 GPR32P1-201ENST00000601788 811 ntBASIC18.06■□□□□ 0.48
LMX1AQ8TE12 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMX1AQ8TE12 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 AC004870.1-201ENST00000315132 882 ntBASIC18.05■□□□□ 0.48
LMX1AQ8TE12 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 UNC93B7-201ENST00000509439 705 ntBASIC18.05■□□□□ 0.48
LMX1AQ8TE12 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 KRT8P50-201ENST00000562022 1438 ntBASIC18.05■□□□□ 0.48
LMX1AQ8TE12 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.05■□□□□ 0.48
LMX1AQ8TE12 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.04■□□□□ 0.48
LMX1AQ8TE12 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LMX1AQ8TE12 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 MTMR9LP-203ENST00000426597 1545 ntBASIC18.03■□□□□ 0.48
LMX1AQ8TE12 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 IGHGP-201ENST00000390555 1178 ntBASIC18.03■□□□□ 0.48
LMX1AQ8TE12 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 FOSL1P1-201ENST00000511041 816 ntBASIC18.03■□□□□ 0.48
LMX1AQ8TE12 AC012615.1-201ENST00000565797 1299 ntBASIC18.03■□□□□ 0.48
LMX1AQ8TE12 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.03■□□□□ 0.48
LMX1AQ8TE12 AL732292.2-201ENST00000609649 430 ntBASIC18.03■□□□□ 0.48
LMX1AQ8TE12 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms