Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 HEIH-201ENST00000623091 1652 ntBASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH20Q8N6Y1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 ARMC10P1-201ENST00000313754 855 ntBASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 AC112497.1-201ENST00000624824 639 ntBASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 AC083906.6-201ENST00000641366 219 ntBASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 AC138932.1-201ENST00000534164 6830 ntBASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 AL049812.1-201ENST00000432563 2267 ntBASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH20Q8N6Y1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 AC026471.1-201ENST00000564629 3026 ntBASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 AC007613.1-201ENST00000572811 2597 ntBASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH20Q8N6Y1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 HOXB1-202ENST00000577092 1414 ntBASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 STARP1-201ENST00000397973 869 ntBASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 AC024243.1-201ENST00000609234 778 ntBASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 MYC-208ENST00000641036 567 ntBASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms