Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 ANO7L1-203ENST00000602586 1720 ntBASIC16.38■□□□□ 0.21
RTTNQ86VV8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 AP000593.1-201ENST00000393668 712 ntBASIC16.38■□□□□ 0.21
RTTNQ86VV8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RTTNQ86VV8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.37■□□□□ 0.21
RTTNQ86VV8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.37■□□□□ 0.21
RTTNQ86VV8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.37■□□□□ 0.21
RTTNQ86VV8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.37■□□□□ 0.21
RTTNQ86VV8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.37■□□□□ 0.21
RTTNQ86VV8 KRT8P3-201ENST00000519669 1449 ntBASIC16.37■□□□□ 0.21
RTTNQ86VV8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.37■□□□□ 0.21
RTTNQ86VV8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RTTNQ86VV8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.37■□□□□ 0.21
RTTNQ86VV8 CKBP1-201ENST00000565489 1086 ntBASIC16.37■□□□□ 0.21
RTTNQ86VV8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RTTNQ86VV8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTTNQ86VV8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.36■□□□□ 0.21
RTTNQ86VV8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
RTTNQ86VV8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTTNQ86VV8 AC126763.1-201ENST00000552015 2118 ntBASIC16.36■□□□□ 0.21
RTTNQ86VV8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTTNQ86VV8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.36■□□□□ 0.21
RTTNQ86VV8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RTTNQ86VV8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RTTNQ86VV8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
RTTNQ86VV8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RTTNQ86VV8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTTNQ86VV8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTTNQ86VV8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.36■□□□□ 0.21
RTTNQ86VV8 AP005242.2-201ENST00000580065 1175 ntBASIC16.36■□□□□ 0.21
RTTNQ86VV8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RTTNQ86VV8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.36■□□□□ 0.21
RTTNQ86VV8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTTNQ86VV8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RTTNQ86VV8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTTNQ86VV8 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.36■□□□□ 0.21
RTTNQ86VV8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RTTNQ86VV8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 INGX-201ENST00000359239 846 ntBASIC16.35■□□□□ 0.21
RTTNQ86VV8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 KRT18P41-201ENST00000518924 1277 ntBASIC16.35■□□□□ 0.21
RTTNQ86VV8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.35■□□□□ 0.21
RTTNQ86VV8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RTTNQ86VV8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RTTNQ86VV8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.34■□□□□ 0.21
RTTNQ86VV8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.34■□□□□ 0.21
RTTNQ86VV8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.34■□□□□ 0.21
RTTNQ86VV8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.34■□□□□ 0.21
RTTNQ86VV8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.34■□□□□ 0.21
RTTNQ86VV8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.34■□□□□ 0.21
RTTNQ86VV8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms