Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 UPF3AP3-201ENST00000420996 769 ntBASIC12.87□□□□□ -0.35
CSMD3Q7Z407 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 LINC01711-201ENST00000598340 967 ntBASIC12.87□□□□□ -0.35
CSMD3Q7Z407 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 AC034236.2-201ENST00000606662 1610 ntBASIC12.87□□□□□ -0.35
CSMD3Q7Z407 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 AC093909.1-201ENST00000504731 1122 ntBASIC12.87□□□□□ -0.35
CSMD3Q7Z407 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 AFG3L1P-217ENST00000557444 2447 ntBASIC12.87□□□□□ -0.35
CSMD3Q7Z407 GOLGA2P11-201ENST00000562660 1621 ntBASIC12.87□□□□□ -0.35
CSMD3Q7Z407 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 AL138831.2-201ENST00000606564 490 ntBASIC12.87□□□□□ -0.35
CSMD3Q7Z407 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CSMD3Q7Z407 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 AC004967.1-201ENST00000453589 447 ntBASIC12.86□□□□□ -0.35
CSMD3Q7Z407 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 TCF3P1-201ENST00000423021 1937 ntBASIC12.86□□□□□ -0.35
CSMD3Q7Z407 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 AC112482.1-201ENST00000492080 688 ntBASIC12.86□□□□□ -0.35
CSMD3Q7Z407 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD3Q7Z407 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.85□□□□□ -0.35
CSMD3Q7Z407 KRT18P27-201ENST00000427733 1299 ntBASIC12.85□□□□□ -0.35
CSMD3Q7Z407 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 AC114341.1-201ENST00000618070 349 ntBASIC12.85□□□□□ -0.35
CSMD3Q7Z407 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 CYMP-203ENST00000474680 1263 ntBASIC12.85□□□□□ -0.35
CSMD3Q7Z407 YBX1P5-201ENST00000509441 847 ntBASIC12.85□□□□□ -0.35
CSMD3Q7Z407 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 AL357033.4-201ENST00000617703 1807 ntBASIC12.85□□□□□ -0.35
CSMD3Q7Z407 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD3Q7Z407 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms