Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PCDHAC2-203ENST00000615316 3011 ntBASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 RNF165-205ENST00000588679 2904 ntBASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 BNIP3P18-201ENST00000593976 575 ntBASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM71Q2Q1W2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TRIM71Q2Q1W2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TRIM71Q2Q1W2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRIM71Q2Q1W2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 AC011840.4-201ENST00000578471 627 ntBASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
TRIM71Q2Q1W2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 POM121L3P-201ENST00000419331 1163 ntBASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 BX640515.1-201ENST00000617215 977 ntBASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM71Q2Q1W2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms