Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN6P56747 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN6P56747 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN6P56747 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN6P56747 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN6P56747 IGHGP-201ENST00000390555 1178 ntBASIC17.79■□□□□ 0.44
CLDN6P56747 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CLDN6P56747 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN6P56747 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN6P56747 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CLDN6P56747 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN6P56747 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN6P56747 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDN6P56747 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN6P56747 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN6P56747 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN6P56747 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN6P56747 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDN6P56747 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDN6P56747 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN6P56747 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 TEX21P-204ENST00000641479 1693 ntBASIC17.78■□□□□ 0.44
CLDN6P56747 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLDN6P56747 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.78■□□□□ 0.44
CLDN6P56747 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
CLDN6P56747 POLD2P1-201ENST00000511220 997 ntBASIC17.78■□□□□ 0.44
CLDN6P56747 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN6P56747 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN6P56747 AP001005.1-201ENST00000571755 1248 ntBASIC17.78■□□□□ 0.44
CLDN6P56747 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN6P56747 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.78■□□□□ 0.44
CLDN6P56747 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN6P56747 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN6P56747 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLDN6P56747 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN6P56747 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN6P56747 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN6P56747 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN6P56747 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN6P56747 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN6P56747 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN6P56747 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CLDN6P56747 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN6P56747 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN6P56747 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN6P56747 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN6P56747 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN6P56747 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN6P56747 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN6P56747 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN6P56747 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN6P56747 AC006333.2-201ENST00000607957 2099 ntBASIC17.77■□□□□ 0.44
CLDN6P56747 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN6P56747 MIR940-201ENST00000401276 94 ntBASIC17.77■□□□□ 0.44
CLDN6P56747 PMS2P1-201ENST00000431037 1228 ntBASIC17.77■□□□□ 0.44
CLDN6P56747 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN6P56747 FAM197Y8-203ENST00000450145 560 ntBASIC17.77■□□□□ 0.44
CLDN6P56747 RN7SL606P-201ENST00000472779 293 ntBASIC17.77■□□□□ 0.44
CLDN6P56747 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN6P56747 AC092865.5-201ENST00000545435 363 ntBASIC17.77■□□□□ 0.44
CLDN6P56747 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLDN6P56747 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN6P56747 HOXB1-202ENST00000577092 1414 ntBASIC17.77■□□□□ 0.44
CLDN6P56747 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLDN6P56747 AIRN-201ENST00000601203 4374 ntBASIC17.77■□□□□ 0.43
CLDN6P56747 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.77■□□□□ 0.43
CLDN6P56747 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN6P56747 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN6P56747 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN6P56747 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN6P56747 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN6P56747 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN6P56747 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN6P56747 MIR564-202ENST00000385049 94 ntBASIC17.76■□□□□ 0.43
CLDN6P56747 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN6P56747 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms