Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.83■□□□□ 0.12
NKX2-5P52952 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
NKX2-5P52952 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
NKX2-5P52952 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.83■□□□□ 0.12
NKX2-5P52952 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NKX2-5P52952 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.83■□□□□ 0.12
NKX2-5P52952 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.83■□□□□ 0.12
NKX2-5P52952 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.83■□□□□ 0.12
NKX2-5P52952 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NKX2-5P52952 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.83■□□□□ 0.12
NKX2-5P52952 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 PTBP1P-201ENST00000554374 1601 ntBASIC15.83■□□□□ 0.12
NKX2-5P52952 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NKX2-5P52952 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NKX2-5P52952 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NKX2-5P52952 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NKX2-5P52952 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 AP005435.1-201ENST00000529293 1178 ntBASIC15.82■□□□□ 0.12
NKX2-5P52952 AL033527.3-201ENST00000566366 1196 ntBASIC15.82■□□□□ 0.12
NKX2-5P52952 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 KRT8P17-201ENST00000453110 1448 ntBASIC15.82■□□□□ 0.12
NKX2-5P52952 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-5P52952 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NKX2-5P52952 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.82■□□□□ 0.12
NKX2-5P52952 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.82■□□□□ 0.12
NKX2-5P52952 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 ZNF815P-204ENST00000434898 1737 ntBASIC15.82■□□□□ 0.12
NKX2-5P52952 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-5P52952 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.82■□□□□ 0.12
NKX2-5P52952 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.82■□□□□ 0.12
NKX2-5P52952 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NKX2-5P52952 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-5P52952 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.82■□□□□ 0.12
NKX2-5P52952 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NKX2-5P52952 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
NKX2-5P52952 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NKX2-5P52952 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
NKX2-5P52952 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX2-5P52952 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX2-5P52952 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX2-5P52952 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX2-5P52952 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.81■□□□□ 0.12
NKX2-5P52952 EEF1DP3-203ENST00000566025 782 ntBASIC15.81■□□□□ 0.12
NKX2-5P52952 AC053503.5-201ENST00000601508 636 ntBASIC15.81■□□□□ 0.12
NKX2-5P52952 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.81■□□□□ 0.12
NKX2-5P52952 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NKX2-5P52952 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NKX2-5P52952 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NKX2-5P52952 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms