Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP11P51784 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.94■□□□□ 0.94
USP11P51784 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.94■□□□□ 0.94
USP11P51784 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP11P51784 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
USP11P51784 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
USP11P51784 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP11P51784 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.93■□□□□ 0.94
USP11P51784 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.93■□□□□ 0.94
USP11P51784 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.93■□□□□ 0.94
USP11P51784 AC073592.3-201ENST00000625118 1834 ntBASIC20.93■□□□□ 0.94
USP11P51784 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
USP11P51784 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.93■□□□□ 0.94
USP11P51784 HBZP1-201ENST00000354915 429 ntBASIC20.93■□□□□ 0.94
USP11P51784 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP11P51784 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.93■□□□□ 0.94
USP11P51784 HLA-F-220ENST00000434407 884 ntBASIC20.93■□□□□ 0.94
USP11P51784 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.93■□□□□ 0.94
USP11P51784 AL671277.2-201ENST00000458060 996 ntBASIC20.93■□□□□ 0.94
USP11P51784 AC092597.1-201ENST00000487352 616 ntBASIC20.93■□□□□ 0.94
USP11P51784 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.93■□□□□ 0.94
USP11P51784 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
USP11P51784 AL445228.2-201ENST00000605589 952 ntBASIC20.93■□□□□ 0.94
USP11P51784 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.93■□□□□ 0.94
USP11P51784 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.93■□□□□ 0.94
USP11P51784 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.93■□□□□ 0.94
USP11P51784 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
USP11P51784 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP11P51784 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP11P51784 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP11P51784 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
USP11P51784 AC009102.3-201ENST00000623118 1491 ntBASIC20.93■□□□□ 0.94
USP11P51784 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP11P51784 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP11P51784 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.93■□□□□ 0.94
USP11P51784 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
USP11P51784 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP11P51784 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
USP11P51784 SDHAP2-201ENST00000455183 2001 ntBASIC20.92■□□□□ 0.94
USP11P51784 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
USP11P51784 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 AL391807.1-203ENST00000604392 2365 ntBASIC20.92■□□□□ 0.94
USP11P51784 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
USP11P51784 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.92■□□□□ 0.94
USP11P51784 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.92■□□□□ 0.94
USP11P51784 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.92■□□□□ 0.94
USP11P51784 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.92■□□□□ 0.94
USP11P51784 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.92■□□□□ 0.94
USP11P51784 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.92■□□□□ 0.94
USP11P51784 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.92■□□□□ 0.94
USP11P51784 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.92■□□□□ 0.94
USP11P51784 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
USP11P51784 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP11P51784 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
USP11P51784 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP11P51784 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
USP11P51784 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP11P51784 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.91■□□□□ 0.94
USP11P51784 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.91■□□□□ 0.94
USP11P51784 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP11P51784 AC126763.1-201ENST00000552015 2118 ntBASIC20.91■□□□□ 0.94
USP11P51784 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP11P51784 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP11P51784 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
USP11P51784 LINC01311-201ENST00000565162 1445 ntBASIC20.91■□□□□ 0.94
USP11P51784 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.91■□□□□ 0.94
USP11P51784 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.91■□□□□ 0.94
USP11P51784 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP11P51784 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP11P51784 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP11P51784 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.9■□□□□ 0.94
USP11P51784 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP11P51784 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
USP11P51784 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.9■□□□□ 0.94
USP11P51784 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.9■□□□□ 0.94
USP11P51784 AL136038.4-201ENST00000603606 1261 ntBASIC20.9■□□□□ 0.94
USP11P51784 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.9■□□□□ 0.94
USP11P51784 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP11P51784 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP11P51784 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP11P51784 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
USP11P51784 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.9■□□□□ 0.94
USP11P51784 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP11P51784 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
USP11P51784 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.9■□□□□ 0.94
USP11P51784 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
USP11P51784 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP11P51784 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP11P51784 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms