Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC23.26■■□□□ 1.31
RFC4P35249 MTDHP3-201ENST00000594186 672 ntBASIC23.26■■□□□ 1.31
RFC4P35249 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.26■■□□□ 1.31
RFC4P35249 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.26■■□□□ 1.31
RFC4P35249 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.26■■□□□ 1.31
RFC4P35249 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFC4P35249 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFC4P35249 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RFC4P35249 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFC4P35249 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.25■■□□□ 1.31
RFC4P35249 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.25■■□□□ 1.31
RFC4P35249 RPS2P28-201ENST00000314255 741 ntBASIC23.25■■□□□ 1.31
RFC4P35249 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
RFC4P35249 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
RFC4P35249 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RFC4P35249 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFC4P35249 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.25■■□□□ 1.31
RFC4P35249 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFC4P35249 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.25■■□□□ 1.31
RFC4P35249 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFC4P35249 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFC4P35249 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RFC4P35249 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.25■■□□□ 1.31
RFC4P35249 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.25■■□□□ 1.31
RFC4P35249 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFC4P35249 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.25■■□□□ 1.31
RFC4P35249 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.25■■□□□ 1.31
RFC4P35249 TP73-AS1-210ENST00000637775 1455 ntBASIC23.24■■□□□ 1.31
RFC4P35249 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.24■■□□□ 1.31
RFC4P35249 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.24■■□□□ 1.31
RFC4P35249 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.24■■□□□ 1.31
RFC4P35249 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
RFC4P35249 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFC4P35249 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFC4P35249 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.24■■□□□ 1.31
RFC4P35249 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.24■■□□□ 1.31
RFC4P35249 RBM17P3-201ENST00000417687 1192 ntBASIC23.24■■□□□ 1.31
RFC4P35249 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.24■■□□□ 1.31
RFC4P35249 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFC4P35249 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.24■■□□□ 1.31
RFC4P35249 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFC4P35249 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
RFC4P35249 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFC4P35249 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.24■■□□□ 1.31
RFC4P35249 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFC4P35249 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.23■■□□□ 1.31
RFC4P35249 AL163051.1-201ENST00000569214 1512 ntBASIC23.23■■□□□ 1.31
RFC4P35249 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFC4P35249 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.23■■□□□ 1.31
RFC4P35249 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFC4P35249 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.23■■□□□ 1.31
RFC4P35249 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.23■■□□□ 1.31
RFC4P35249 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFC4P35249 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.23■■□□□ 1.31
RFC4P35249 MED16-201ENST00000269814 1199 ntTSL 5 BASIC23.23■■□□□ 1.31
RFC4P35249 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RFC4P35249 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
RFC4P35249 AC005104.2-201ENST00000427818 678 ntBASIC23.23■■□□□ 1.31
RFC4P35249 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC23.23■■□□□ 1.31
RFC4P35249 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFC4P35249 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.23■■□□□ 1.31
RFC4P35249 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.23■■□□□ 1.31
RFC4P35249 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFC4P35249 PAN3-AS1-201ENST00000563843 1351 ntBASIC23.23■■□□□ 1.31
RFC4P35249 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFC4P35249 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFC4P35249 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFC4P35249 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
RFC4P35249 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFC4P35249 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.22■■□□□ 1.31
RFC4P35249 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFC4P35249 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.22■■□□□ 1.31
RFC4P35249 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFC4P35249 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
RFC4P35249 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.22■■□□□ 1.31
RFC4P35249 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.22■■□□□ 1.31
RFC4P35249 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RFC4P35249 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RFC4P35249 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFC4P35249 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.22■■□□□ 1.31
RFC4P35249 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFC4P35249 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFC4P35249 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RFC4P35249 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.21■■□□□ 1.31
RFC4P35249 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
RFC4P35249 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
RFC4P35249 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RFC4P35249 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RFC4P35249 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
RFC4P35249 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC23.21■■□□□ 1.31
RFC4P35249 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.21■■□□□ 1.31
RFC4P35249 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.21■■□□□ 1.31
RFC4P35249 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RFC4P35249 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RFC4P35249 AC005336.2-201ENST00000593183 939 ntBASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms