Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.3■□□□□ 0.52
BCKDHBP21953 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BCKDHBP21953 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.3■□□□□ 0.52
BCKDHBP21953 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.3■□□□□ 0.52
BCKDHBP21953 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.3■□□□□ 0.52
BCKDHBP21953 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.3■□□□□ 0.52
BCKDHBP21953 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BCKDHBP21953 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.3■□□□□ 0.52
BCKDHBP21953 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BCKDHBP21953 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.3■□□□□ 0.52
BCKDHBP21953 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 KRT8P50-201ENST00000562022 1438 ntBASIC18.3■□□□□ 0.52
BCKDHBP21953 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
BCKDHBP21953 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BCKDHBP21953 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHBP21953 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHBP21953 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.29■□□□□ 0.52
BCKDHBP21953 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BCKDHBP21953 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHBP21953 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
BCKDHBP21953 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BCKDHBP21953 AF186996.4-201ENST00000467186 377 ntBASIC18.29■□□□□ 0.52
BCKDHBP21953 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHBP21953 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.29■□□□□ 0.52
BCKDHBP21953 POLD2P1-201ENST00000511220 997 ntBASIC18.29■□□□□ 0.52
BCKDHBP21953 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.29■□□□□ 0.52
BCKDHBP21953 AC009065.1-201ENST00000564055 1225 ntBASIC18.29■□□□□ 0.52
BCKDHBP21953 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.29■□□□□ 0.52
BCKDHBP21953 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.29■□□□□ 0.52
BCKDHBP21953 AL049840.3-201ENST00000602669 611 ntBASIC18.29■□□□□ 0.52
BCKDHBP21953 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 FP475955.4-201ENST00000623131 1990 ntBASIC18.29■□□□□ 0.52
BCKDHBP21953 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHBP21953 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.29■□□□□ 0.52
BCKDHBP21953 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHBP21953 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BCKDHBP21953 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHBP21953 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.29■□□□□ 0.52
BCKDHBP21953 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BCKDHBP21953 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BCKDHBP21953 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.28■□□□□ 0.52
BCKDHBP21953 AL357033.4-201ENST00000617703 1807 ntBASIC18.28■□□□□ 0.52
BCKDHBP21953 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.28■□□□□ 0.52
BCKDHBP21953 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.28■□□□□ 0.52
BCKDHBP21953 KRT18P58-201ENST00000527480 1120 ntBASIC18.28■□□□□ 0.52
BCKDHBP21953 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.28■□□□□ 0.52
BCKDHBP21953 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.28■□□□□ 0.52
BCKDHBP21953 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.28■□□□□ 0.52
BCKDHBP21953 AC008608.2-201ENST00000606089 416 ntBASIC18.28■□□□□ 0.52
BCKDHBP21953 AC114341.1-201ENST00000618070 349 ntBASIC18.28■□□□□ 0.52
BCKDHBP21953 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.28■□□□□ 0.52
BCKDHBP21953 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BCKDHBP21953 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
BCKDHBP21953 PCDHAC2-203ENST00000615316 3011 ntBASIC18.28■□□□□ 0.52
BCKDHBP21953 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHBP21953 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHBP21953 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHBP21953 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHBP21953 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHBP21953 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHBP21953 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
BCKDHBP21953 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHBP21953 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
BCKDHBP21953 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.27■□□□□ 0.52
BCKDHBP21953 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
BCKDHBP21953 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BCKDHBP21953 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
BCKDHBP21953 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms