Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.58■■□□□ 1.05
PRPF40AO75400 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.58■■□□□ 1.05
PRPF40AO75400 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
PRPF40AO75400 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
PRPF40AO75400 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRPF40AO75400 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PRPF40AO75400 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRPF40AO75400 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRPF40AO75400 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRPF40AO75400 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.58■■□□□ 1.04
PRPF40AO75400 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.58■■□□□ 1.04
PRPF40AO75400 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
PRPF40AO75400 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.58■■□□□ 1.04
PRPF40AO75400 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.58■■□□□ 1.04
PRPF40AO75400 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRPF40AO75400 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.57■■□□□ 1.04
PRPF40AO75400 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.57■■□□□ 1.04
PRPF40AO75400 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF40AO75400 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
PRPF40AO75400 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PRPF40AO75400 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF40AO75400 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.57■■□□□ 1.04
PRPF40AO75400 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.57■■□□□ 1.04
PRPF40AO75400 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.57■■□□□ 1.04
PRPF40AO75400 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.57■■□□□ 1.04
PRPF40AO75400 AP003097.1-201ENST00000530657 1135 ntBASIC21.57■■□□□ 1.04
PRPF40AO75400 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF40AO75400 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.57■■□□□ 1.04
PRPF40AO75400 AC008687.6-201ENST00000596318 630 ntBASIC21.57■■□□□ 1.04
PRPF40AO75400 REXO1L9P-201ENST00000604264 2108 ntBASIC21.57■■□□□ 1.04
PRPF40AO75400 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.57■■□□□ 1.04
PRPF40AO75400 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF40AO75400 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.57■■□□□ 1.04
PRPF40AO75400 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
PRPF40AO75400 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
PRPF40AO75400 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF40AO75400 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF40AO75400 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF40AO75400 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRPF40AO75400 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.57■■□□□ 1.04
PRPF40AO75400 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRPF40AO75400 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRPF40AO75400 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRPF40AO75400 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRPF40AO75400 KRT8P41-201ENST00000533985 1514 ntBASIC21.56■■□□□ 1.04
PRPF40AO75400 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.56■■□□□ 1.04
PRPF40AO75400 AC026366.1-201ENST00000488803 879 ntBASIC21.56■■□□□ 1.04
PRPF40AO75400 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PRPF40AO75400 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.56■■□□□ 1.04
PRPF40AO75400 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.56■■□□□ 1.04
PRPF40AO75400 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRPF40AO75400 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRPF40AO75400 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PRPF40AO75400 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.56■■□□□ 1.04
PRPF40AO75400 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.55■■□□□ 1.04
PRPF40AO75400 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PRPF40AO75400 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF40AO75400 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF40AO75400 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PRPF40AO75400 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.55■■□□□ 1.04
PRPF40AO75400 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.55■■□□□ 1.04
PRPF40AO75400 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PRPF40AO75400 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.55■■□□□ 1.04
PRPF40AO75400 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PRPF40AO75400 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF40AO75400 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.55■■□□□ 1.04
PRPF40AO75400 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.55■■□□□ 1.04
PRPF40AO75400 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PRPF40AO75400 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.55■■□□□ 1.04
PRPF40AO75400 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF40AO75400 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.55■■□□□ 1.04
PRPF40AO75400 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.55■■□□□ 1.04
PRPF40AO75400 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PRPF40AO75400 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PRPF40AO75400 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PRPF40AO75400 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF40AO75400 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.55■■□□□ 1.04
PRPF40AO75400 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF40AO75400 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRPF40AO75400 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.54■■□□□ 1.04
PRPF40AO75400 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.54■■□□□ 1.04
PRPF40AO75400 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.54■■□□□ 1.04
PRPF40AO75400 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PRPF40AO75400 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.54■■□□□ 1.04
PRPF40AO75400 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PRPF40AO75400 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.54■■□□□ 1.04
PRPF40AO75400 AC006058.3-201ENST00000606217 1069 ntBASIC21.54■■□□□ 1.04
PRPF40AO75400 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRPF40AO75400 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.54■■□□□ 1.04
PRPF40AO75400 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms