Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 TERF1P1-201ENST00000311003 1181 ntBASIC18.82■□□□□ 0.6
CAPN8A6NHC0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 DUX4L26-201ENST00000489078 1255 ntBASIC18.82■□□□□ 0.6
CAPN8A6NHC0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 AC010203.1-204ENST00000548782 407 ntBASIC18.82■□□□□ 0.6
CAPN8A6NHC0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 LINC01238-205ENST00000567549 1107 ntBASIC18.82■□□□□ 0.6
CAPN8A6NHC0 AL512604.3-201ENST00000569583 964 ntBASIC18.82■□□□□ 0.6
CAPN8A6NHC0 MIR3180-5-201ENST00000583743 153 ntBASIC18.82■□□□□ 0.6
CAPN8A6NHC0 CR769767.2-201ENST00000622735 460 ntBASIC18.82■□□□□ 0.6
CAPN8A6NHC0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 KRT8P45-201ENST00000414328 1447 ntBASIC18.82■□□□□ 0.6
CAPN8A6NHC0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CAPN8A6NHC0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 AC036111.1-201ENST00000533973 1582 ntBASIC18.81■□□□□ 0.6
CAPN8A6NHC0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 WWOX-216ENST00000569818 525 ntBASIC18.81■□□□□ 0.6
CAPN8A6NHC0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 AC008556.1-201ENST00000610908 2040 ntBASIC18.81■□□□□ 0.6
CAPN8A6NHC0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.81■□□□□ 0.6
CAPN8A6NHC0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CAPN8A6NHC0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 MTMR9LP-203ENST00000426597 1545 ntBASIC18.79■□□□□ 0.6
CAPN8A6NHC0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.79■□□□□ 0.6
CAPN8A6NHC0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms