Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 Z98044.1-201ENST00000632503 1764 ntBASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 KRT8P50-201ENST00000562022 1438 ntBASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 FP475955.4-201ENST00000623131 1990 ntBASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 IRX1P1-201ENST00000438849 1838 ntBASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 AC145285.3-201ENST00000564603 959 ntBASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC163A0A0D9SF12 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 RCN1P2-201ENST00000398357 915 ntBASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 AC009533.2-201ENST00000543664 586 ntBASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 TP73-AS1-210ENST00000637775 1455 ntBASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC163A0A0D9SF12 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 AL163051.1-201ENST00000569214 1512 ntBASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 AC005104.2-201ENST00000427818 678 ntBASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 MTDHP3-201ENST00000594186 672 ntBASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 AC116407.3-201ENST00000623905 1129 ntBASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 AC112777.1-201ENST00000540175 1423 ntBASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 AL137060.1-201ENST00000618151 2648 ntBASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC163A0A0D9SF12 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms