Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 NUS1P1-201ENST00000446295 882 ntBASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO28Q9NVF7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 IGHV3-41-201ENST00000613121 348 ntBASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO28Q9NVF7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 KRT18P41-201ENST00000518924 1277 ntBASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 AC090616.6-201ENST00000582640 721 ntBASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.33■■□□□ 1.01
FBXO28Q9NVF7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
FBXO28Q9NVF7 AL163051.1-201ENST00000569214 1512 ntBASIC21.33■■□□□ 1
FBXO28Q9NVF7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
FBXO28Q9NVF7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
FBXO28Q9NVF7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
FBXO28Q9NVF7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
FBXO28Q9NVF7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.32■■□□□ 1
FBXO28Q9NVF7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
FBXO28Q9NVF7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.32■■□□□ 1
FBXO28Q9NVF7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.32■■□□□ 1
FBXO28Q9NVF7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FBXO28Q9NVF7 TSPY19P-201ENST00000418461 509 ntBASIC21.32■■□□□ 1
FBXO28Q9NVF7 TSPY18P-201ENST00000441642 509 ntBASIC21.32■■□□□ 1
FBXO28Q9NVF7 FOSL1P1-201ENST00000511041 816 ntBASIC21.32■■□□□ 1
FBXO28Q9NVF7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.32■■□□□ 1
FBXO28Q9NVF7 AC111152.3-201ENST00000569699 673 ntBASIC21.32■■□□□ 1
FBXO28Q9NVF7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.32■■□□□ 1
FBXO28Q9NVF7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.32■■□□□ 1
FBXO28Q9NVF7 IFNL4P1-201ENST00000607083 540 ntBASIC21.32■■□□□ 1
FBXO28Q9NVF7 AC083906.6-201ENST00000641366 219 ntBASIC21.32■■□□□ 1
FBXO28Q9NVF7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.32■■□□□ 1
FBXO28Q9NVF7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.32■■□□□ 1
FBXO28Q9NVF7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.32■■□□□ 1
FBXO28Q9NVF7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
FBXO28Q9NVF7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.32■■□□□ 1
FBXO28Q9NVF7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FBXO28Q9NVF7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.31■■□□□ 1
FBXO28Q9NVF7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FBXO28Q9NVF7 LINC00167-201ENST00000530583 1419 ntBASIC21.31■■□□□ 1
FBXO28Q9NVF7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.31■■□□□ 1
FBXO28Q9NVF7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.31■■□□□ 1
FBXO28Q9NVF7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.31■■□□□ 1
FBXO28Q9NVF7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 AC012615.1-201ENST00000565797 1299 ntBASIC21.31■■□□□ 1
FBXO28Q9NVF7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 AL592071.1-201ENST00000611956 408 ntBASIC21.31■■□□□ 1
FBXO28Q9NVF7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.31■■□□□ 1
FBXO28Q9NVF7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
FBXO28Q9NVF7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms