Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTN4Q9NQC3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
RTN4Q9NQC3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.89■■□□□ 1.1
RTN4Q9NQC3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
RTN4Q9NQC3 PCDHB19P-201ENST00000570871 2371 ntBASIC21.89■■□□□ 1.1
RTN4Q9NQC3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RTN4Q9NQC3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTN4Q9NQC3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTN4Q9NQC3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 AC009237.14-201ENST00000609975 1594 ntBASIC21.88■■□□□ 1.09
RTN4Q9NQC3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 AC023824.1-201ENST00000562945 2975 ntBASIC21.88■■□□□ 1.09
RTN4Q9NQC3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTN4Q9NQC3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 ZNRF2P3-201ENST00000424200 374 ntBASIC21.87■■□□□ 1.09
RTN4Q9NQC3 AC010536.3-201ENST00000620306 533 ntBASIC21.87■■□□□ 1.09
RTN4Q9NQC3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.87■■□□□ 1.09
RTN4Q9NQC3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTN4Q9NQC3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 AC016405.3-201ENST00000607710 860 ntBASIC21.86■■□□□ 1.09
RTN4Q9NQC3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTN4Q9NQC3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms