Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF558Q96NG5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 AKR1C7P-201ENST00000305623 895 ntBASIC19.71■□□□□ 0.75
ZNF558Q96NG5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 SAPCD2P3-201ENST00000455031 850 ntBASIC19.71■□□□□ 0.75
ZNF558Q96NG5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF558Q96NG5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 AP000593.1-201ENST00000393668 712 ntBASIC19.7■□□□□ 0.74
ZNF558Q96NG5 MRPL3P1-201ENST00000400109 1033 ntBASIC19.7■□□□□ 0.74
ZNF558Q96NG5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 AC091607.1-201ENST00000490318 1060 ntBASIC19.7■□□□□ 0.74
ZNF558Q96NG5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF558Q96NG5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 AL158211.5-201ENST00000623583 2518 ntBASIC19.69■□□□□ 0.74
ZNF558Q96NG5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 AC004263.2-201ENST00000617183 678 ntBASIC19.69■□□□□ 0.74
ZNF558Q96NG5 REXO1L6P-202ENST00000619970 1078 ntBASIC19.69■□□□□ 0.74
ZNF558Q96NG5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 CLDN5-201ENST00000403084 2357 ntBASIC19.69■□□□□ 0.74
ZNF558Q96NG5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ZNF558Q96NG5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF558Q96NG5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms